Complex 6t3r
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.57 |
| System mass | 132.25 kDa |
| Deposition year | 2019 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Oceanobacillus |
| RCSB PDB Entry | 6t3r |
| Reference | Manigrasso Jacopo, Chillón Isabel, Genna Vito, Vidossich Pietro, Somarowthu Srinivas, Pyle Anna Marie, De Vivo Marco, Marcia Marco. . Visualizing group II intron dynamics between the first and second steps of splicing Nature Communications |
| Compound | EPE |
| Residue | . / 447 |
| Chain | WA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 120.74 Å3 |
| Hydrophobicity | 0.019 |
| Hydrophilicity | 1.130 |
| Buriedness | 0.688 |
| Don/acc character | 1.672 |
| SiteScore | 0.694 |
| D Score | 0.408 |
| Compound | EPE |
| Residue | . / 454 |
| Chain | DB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | SPM |
| Residue | . / 452 |
| Chain | BB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 240.10 Å3 |
| Hydrophobicity | 0.142 |
| Hydrophilicity | 0.990 |
| Buriedness | 0.616 |
| Don/acc character | 1.015 |
| SiteScore | 0.793 |
| D Score | 0.587 |
| Compound | SPM |
| Residue | . / 453 |
| Chain | CB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 207.17 Å3 |
| Hydrophobicity | 0.167 |
| Hydrophilicity | 1.245 |
| Buriedness | 0.728 |
| Don/acc character | 1.577 |
| SiteScore | 0.811 |
| D Score | 0.510 |