Complex 6t3r
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.57 |
| System mass | 132.25 kDa |
| Deposition year | 2019 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Oceanobacillus |
| RCSB PDB Entry | 6t3r |
| Reference | Manigrasso Jacopo, Chillón Isabel, Genna Vito, Vidossich Pietro, Somarowthu Srinivas, Pyle Anna Marie, De Vivo Marco, Marcia Marco. . Visualizing group II intron dynamics between the first and second steps of splicing Nature Communications |
| Compound | EPE |
| Residue | . / 447 |
| Chain | WA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 111.47 Å3 |
| Hydrophobicity | 0.234 |
| Hydrophilicity | 1.195 |
| Buriedness | 0.687 |
| Don/acc character | 1.489 |
| SiteScore | 0.544 |
| D Score | 0.387 |
| Compound | EPE |
| Residue | . / 454 |
| Chain | DB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 74.43 Å3 |
| Hydrophobicity | 0.145 |
| Hydrophilicity | 1.049 |
| Buriedness | 0.579 |
| Don/acc character | 3.459 |
| SiteScore | 0.481 |
| D Score | 0.382 |
| Compound | SPM |
| Residue | . / 452 |
| Chain | BB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 233.93 Å3 |
| Hydrophobicity | 0.050 |
| Hydrophilicity | 1.240 |
| Buriedness | 0.656 |
| Don/acc character | 0.552 |
| SiteScore | 0.660 |
| D Score | 0.530 |
| Compound | SPM |
| Residue | . / 453 |
| Chain | CB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 196.54 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.546 |
| Buriedness | 0.739 |
| Don/acc character | 1.293 |
| SiteScore | 0.722 |
| D Score | 0.488 |