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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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267 RNA-SM complexes found
Structure of complex 5fk5

5fk5

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is AA

SM: SAM

Structure of complex 5fk6

5fk6

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CA

SM: SAM

Structure of complex 5fkd

5fkd

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UA

SM: SAM

Structure of complex 5fke

5fke

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GU

SM: SAM

Structure of complex 5fkf

5fkf

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UC

SM: SAM

Structure of complex 5fkg

5fkg

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CG

SM: SAM

Structure of complex 5fkh

5fkh

SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CU

SM: SAM

Structure of complex 5kx9

5kx9

Selective Small Molecule Inhibition of the FMN Riboswitch

SM: 6YG

Structure of complex 5t83

5t83

Structure of a guanidine-I riboswitch from S. acidophilus

SM: SPK

Structure of complex 5vj9

5vj9

Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa

SM: SPM SPM SPM SPM SPM

Structure of complex 5vjb

5vjb

Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa

SM: SPM SPM SPM SPM

Structure of complex 6bfb

6bfb

Crystal structure of a F. nucleatum FMN riboswitch bound to WG-3

SM: DKM

Structure of complex 6cb3

6cb3

Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium

SM: GTP GTP

Structure of complex 6cc1

6cc1

Crystal structure of ykoY-alx riboswitch chimera bound to cadmium

SM: GTP GTP

Structure of complex 6cc3

6cc3

Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium

SM: GTP

Structure of complex 6ck4

6ck4

G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp

SM: G4P G4P G4P G4P GTP

Structure of complex 6ck5

6ck5

PRPP riboswitch from T. mathranii bound to PRPP

SM: PRP PRP

Structure of complex 6dlq

6dlq

PRPP Riboswitch bound to PRPP, manganese chloride soaked structure

SM: PRP

Structure of complex 6dlr

6dlr

PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure

SM: PRP

Structure of complex 6dls

6dls

PRPP Riboswitch bound to PRPP, thallium acetate soaked structure

SM: PRP

Structure of complex 6dlt

6dlt

PRPP Riboswitch bound to PRPP, native structure

SM: PRP

Structure of complex 6dmc

6dmc

ppGpp Riboswitch bound to ppGpp, native structure

SM: G4P G4P

Structure of complex 6dmd

6dmd

ppGpp Riboswitch bound to ppGpp, manganese chloride structure

SM: G4P G4P

Structure of complex 6dme

6dme

ppGpp Riboswitch bound to ppGpp, thallium acetate structure

SM: G4P

Structure of complex 6dn1

6dn1

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1151 SPLIT RNA

SM: GZ7

Structure of complex 6dn2

6dn2

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA

SM: GZG

Structure of complex 6dn3

6dn3

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA

SM: GZ4

Structure of complex 6e1s

6e1s

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine

SM: HLV

Structure of complex 6e1t

6e1t

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine

SM: HLV MES

Structure of complex 6e1u

6e1u

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 2: 2-[(dibenzo[b,d]furan-2-yl)oxy]-N,N-dimethylethan-1-amine

SM: HMJ

Structure of complex 6e1v

6e1v

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 3: 2-[(9H-carbazol-3-yl)oxy]-N,N-dimethylethan-1-amine

SM: HMV

Structure of complex 6e1w

6e1w

Crystal structure of a class I PreQ1 riboswitch complexed with PreQ1

SM: HNG

Structure of complex 6fz0

6fz0

Crystal structure of the metY SAM V riboswitch

SM: SAM

Structure of complex 6hag

6hag

The structure of the SAM/SAH-binding riboswitch.

SM: SAH

Structure of complex 6hbt

6hbt

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with arcaine

SM: FXQ

Structure of complex 6hc5

6hc5

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with audouine

SM: FXT

Structure of complex 6las

6las

the wildtype SAM-VI riboswitch bound to SAM

SM: SAM SAM

Structure of complex 6lau

6lau

the wildtype SAM-VI riboswitch bound to SAH

SM: GTP SAH SAH

Structure of complex 6lax

6lax

the mutant SAM-VI riboswitch (U6C) bound to SAM

SM: SAM SAM

Structure of complex 6laz

6laz

the wildtype SAM-VI riboswitch bound to a N-mustard SAM analog M1

SM: E7X E7X

Structure of complex 6n5k

6n5k

Structure of Human pir-miRNA-449c Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5n

6n5n

Structure of Human pir-miRNA-208a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5o

6n5o

Structure of Human pir-miRNA-202 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5p

6n5p

Structure of Human pir-miRNA-340 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5q

6n5q

Structure of Human pir-miRNA-378a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5s

6n5s

Structure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA 5GP

Structure of complex 6n5t

6n5t

Structure of Human pir-miRNA-378a Apical Loop Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6od9

6od9

Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser

SM: AMZ AMZ

Structure of complex 6p2h

6p2h

Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches

SM: GNG

Structure of complex 6q57

6q57

X-ray crystal structure of the tetrahydrofolate riboswitch aptamer bound to 5-deazatetrahydropterin

SM: T0A T0A

Structure of complex 6tb7

6tb7

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine monophosphate (AMP)

SM: AMP

Structure of complex 6tf0

6tf0

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH)

SM: NAI

Structure of complex 6tf1

6tf1

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine diphosphate (ADP)

SM: ADP

Structure of complex 6tf2

6tf2

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 5-triphosphate (ATP)

SM: ATP

Structure of complex 6tf3

6tf3

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)

SM: 3AT

Structure of complex 6tfe

6tfe

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)

SM: N6E

Structure of complex 6tff

6tff

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide (NAD+)

SM: NAD

Structure of complex 6tfg

6tfg

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)

SM: PPS

Structure of complex 6tfh

6tfh

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH); soaking with Manganese(II) (Mn2+)

SM: NAD

Structure of complex 6uc7

6uc7

Structure of guanine riboswitch bound to N2-acetyl guanine

SM: Q44