HARIBOSS - RNA-SM complexes list

6p1s

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Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated AMP

SM: ATP

6p71

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X-ray crystal structure of a bacterial reiterative transcription complex of pyrBI promoter

SM: UTP

6rh3

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Cryo-EM structure of E. coli RNA polymerase elongation complex bound to CTP substrate

SM: CTP

6usr

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Telomerase Reverse Transcriptase ternary complex, TERT:DNA:dGpCpp

SM: G2P

6uu0

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E. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching GTP ("Fresh" crystal soaked with GTP for 1 hour)

SM: GTP

6uu1

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E. coli sigma-S transcription initiation complex with a 4-nt RNA and a CTP ("Fresh" crystal soaked with CTP, GTP, and ddTTP for 30 minutes)

SM: CTP

6uu2

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E. coli sigma-S transcription initiation complex with 3-nt RNA ("Old" crystal soaked with GTP and ATP for 30 minutes)

SM: GTP

6uu4

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E. coli sigma-S transcription initiation complex with a 3-nt RNA ("old" crystal soaked with GTP and dinucleotide GpA for 30 minutes)

SM: GTP

6uu6

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E. coli sigma-S transcription initiation complex with a 4-nt RNA and a UTP ("Old" crystal soaked with UTP, ddCTP, and dinucleotide ApG for 30 minutes)

SM: UTP

6uuc

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E. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching ATP ("Fresh" crystal soaked with ATP for 2 hours)

SM: ATP

6wox

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Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP

SM: DCP

6woy

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Thermus thermophilus RNA polymerase initially transcribing complex with 3'dCTP

SM: CH1

6ymw

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Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex

SM: P5E

7eh0

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Thermus thermophilus RNA polymerase transcription initiation complex containing a template-strand purine at position TSS-2, UpA RNA primer and CMPcPP

SM: 2TM

7eh1

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Thermus thermophilus transcription initiation complex containing a template-strand purine at position TSS-2, GpG RNA primer, and CMPcPP

SM: 2TM

7k9y

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GsI-IIC RT Template-Switching Complex (twinned)

SM: DTP DTP

7kqn

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Ternary complex of TERT (telomerase reverse transcriptase) with RNA template, DNA primer, an incoming dGTP and a downstream hybrid duplex

SM: DGT DGT

7m7m

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Human DNA Pol eta with rA-ended primer and dAMPNPP

SM: DZ4

7m7r

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Human DNA Pol eta S113A with rA-ended primer and dAMPNPP

SM: DZ4

7m89

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Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 0 s

SM: DTP

7mkn

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Escherichia coli RNA polymerase and RapA elongation complex

SM: 2TM

7mko

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Escherichia coli RNA polymerase elongation complex

SM: 2TM

7n2m

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Crystal structure of DNA polymerase alpha catalytic core in complex with dCTP and template/primer having T-C mismatch at the post-insertion site

SM: DCP

7vba

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Structure of the pre state human RNA Polymerase I Elongation Complex

SM: 2TM

7y7r

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QDE-1 in complex with DNA template, RNA primer and 3'-dGTP

SM: GTP GTP

7y7s

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QDE-1 in complex with DNA template, RNA primer and AMPNPP

SM: ZAN ZAN

7y7t

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QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP

SM: GTP

8c8j

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Long Interspersed Nuclear Element 1 (LINE-1) reverse transcriptase ternary complex with hybrid duplex and dTTP

SM: TTP

8dh4

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T7 RNA polymerase elongation complex with unnatural base dPa-DsTP pair

SM: S96 S96

8dh5

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T7 RNA polymerase elongation complex with unnatural base dPa-ATP mismatch

SM: ATP ATP ATP ATP

8e85

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Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mn2+

SM: XG4

8e86

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Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mn2+

SM: XG4

8e87

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Human DNA polymerase eta-DNA-rA-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

8e88

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Human DNA polymerase eta-DNA-rU-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

8e8b

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Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion

SM: DGT

8e8c

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Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 30s

SM: DGT

8e8d

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Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 60s

SM: DGT

8e8j

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Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

8e8k

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Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

8ej3

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M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP

SM: G2P

8eos

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M. tuberculosis RNAP elongation complex with NusG and CMPCPP

SM: 2TM

8exy

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M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP

SM: G2P

8g9l

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DNA initiation subcomplex of Xenopus laevis DNA polymerase alpha-primase

SM: DGT

8gh6

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Bombyx mori R2 retrotransposon initiating target-primed reverse transcription

SM: TTP

8gzh

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Cryo-EM structure of Synechocystis sp. PCC 6803 CTP-bound RPitc

SM: CTP

8sxt

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Structure of LINE-1 ORF2p with template:primer hybrid

SM: TTP

8sy5

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E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dS-BTP base pair in the active site

SM: X0F

8sy6

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E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-UTP base pair in the active site

SM: DGP UTP

8sy7

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E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-STP base pair in the active site

SM: X0O

8txo

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E. coli DNA-directed RNA polymerase transcription elongation complex bound to the unnatural dZ-PTP base pair in the active site

SM: S9F

8u8u

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Cryo-EM Structure of Cognate Substrate ATP Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex

SM: APC

8u8v

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Cryo-EM structure of Substrate ATP Bound in the Insertion Site (IS) of Human Mitochondrial Transcription Elongation Complex

SM: APC

8u9r

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STRUCTURAL BASIS OF TRANSCRIPTION: RNA POLYMERASE II SUBSTRATE BINDING AND METAL COORDINATION USING A FREE-ELECTRON LASER

SM: ATP

8u9x

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STRUCTURAL BASIS OF TRANSCRIPTION: RNA POLYMERASE II SUBSTRATE BINDING AND METAL COORDINATION AT 3.0 A OF T834P MUTANT USING A FREE-ELECTRON LASER

SM: ATP

8uks

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RNA polymerase II elongation complex with Fapy-dG lesion soaking with CTP before chemistry

SM: CTP

8urw

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Cyanobacterial RNA polymerase elongation complex with NusG and CTP

SM: CTP

8uw3

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Human LINE-1 retrotransposon ORF2 protein engaged with template RNA in elongation state

SM: TTP

8v6g

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DNA initiation complex (configuration 1) of Xenopus laevis DNA polymerase alpha-primase

SM: DGT

8v6h

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DNA initiation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase

SM: DGT

8w8p

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Thermus thermophilus initiation transcription complex containing CMPcPP in the post-translocated state

SM: 2TM