HARIBOSS - RNA-SM complexes list

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DNA initiation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase

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Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positioned 3nt downstream of TSS.

SM: W0F

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Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positioned 4nt downstream of TSS.

SM: W0F

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Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positioned 5nt downstream of TSS.

SM: W0F

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Thermus thermophilus initiation transcription complex containing CMPcPP in the post-translocated state

SM: 2TM

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Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positioned 2nt downstream of TSS.

SM: W0F

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Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positioned 8nt downstream of TSS.

SM: W0F

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Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positioned 9nt downstream of TSS.

SM: W0F

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De novo transcribing complex 10 (TC10), the early elongation complex with Pol II positioned 10nt downstream of TSS

SM: W0F

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De novo transcribing complex 11 (TC11), the early elongation complex with Pol II positioned 11nt downstream of TSS

SM: W0F

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De novo transcribing complex 12 (TC12), the early elongation complex with Pol II positioned 12nt downstream of TSS

SM: W0F

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De novo transcribing complex 13 (TC13), the early elongation complex with Pol II positioned 13nt downstream of TSS

SM: W0F

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De novo transcribing complex 14 (TC14), the early elongation complex with Pol II positioned 14nt downstream of TSS

SM: W0F

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De novo transcribing complex 15 (TC15), the early elongation complex with Pol II positioned 15nt downstream of TSS

SM: W0F

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De novo transcribing complex 16 (TC16), the early elongation complex with Pol II positioned 16nt downstream of TSS

SM: W0F

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De novo transcribing complex 17 (TC17), the early elongation complex with Pol II positioned 17nt downstream of TSS

SM: W0F

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Human RNA Polymerase III de novo transcribing complex 4 (TC4)

SM: 3AT GTP

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Cryo-EM Structure of Non-Cognate Substrate Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex

SM: APC

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Structure of the elongating DRT2 reverse transcriptase in complex with its non-coding RNA and dNTPs

SM: TTP

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Taeniopygia guttata R2 retrotransposon (R2Tg) initiating target-primed reverse transcription

SM: TTP

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Yeast RNA polymerase I elongation complex stalled by an apurinic site bound to nucleotide analog AMPCPP at A-site

SM: APC

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Structure of human LINE-1 ORF2p with endogenous DNA and RNA/cDNA hybrid bound to dNTP and Mn2+

SM: DTP

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Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3)

SM: GTP

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Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFB2M/DNA/RNA) without TFAM; and with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3-TFAM)

SM: GTP

9hdo

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The Human LINE-1 ORF2p target-primed reverse transcription complex

SM: D3T

9hdp

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The Human LINE-1 ORF2p target-primed reverse transcription complex with the fingers domain in a closed conformation

SM: D3T

9hdr

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Human LINE-1 ORF2p target-primed reverse transcription complex with EN domain resolved

SM: D3T

9ja1

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The RNA polymerase II elongation complex from Saccharomyces cerevisiae

SM: ATP

9k2g

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Human RNA Polymerase III de novo transcribing complex 13 (TC13)

SM: 3AT

9k36

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Human RNA Polymerase III de novo transcribing complex 12 (TC12)

SM: 3AT

9k38

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Human RNA Polymerase III de novo transcribing complex 6 (TC6)

SM: 3AT GTP

9k39

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Human RNA Polymerase III de novo transcribing complex 8 (TC8)

SM: 3AT GTP

9k3b

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Human RNA Polymerase III de novo transcribing complex 10 overall (TC10-overall)

SM: 3AT

9k3u

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Human RNA Polymerase III de novo transcribing complex 5 (TC5)

SM: GTP

9ljf

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Cryo-EM structure of the dGTP bound DRT2-ncRNA complex

SM: DGT

9lkt

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Human RNA Polymerase III de novo transcribing complex 10 (TC10)

SM: 3AT

9lxo

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Human RNA Polymerase III de novo transcribing complex 6 (TC6)(without 3'dATP)

SM: GTP

9mn6

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Structure of the human mitochondrial late-stage transcription initiation complex, IC8

SM: ATP

9mn7

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Structure of the human mitochondrial late-stage transcription initiation complex, IC8

SM: ATP

9mn8

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Structure of the human mitochondrial transcription initiation transitional complex, TC8

SM: ATP

9mn9

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Structure of the human mitochondrial promoter-initiated transcription elongation complex, P-EC13

SM: CH1

9mna

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Structure of the human mitochondrial promoter-initiated transcription elongation complex with TEFM, pEC9-TEFM

SM: ATP

9n5c

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RNA polymerase II elongation complex with 8-oxoG at +1 site, CMPCPP-bound

SM: 2TM

9n5e

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RNA polymerase II elongation complex with 8-oxoG at +1 site, AMPCPP in E-site

SM: APC

9n5g

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RNA polymerase II elongation complex with 8-oxoG at +1 site, ATP in both A- and E-site

SM: ATP

9nl2

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Structure of R2 retrotransposon protein from Platysternon megacephalum initiating target-primed reverse transcription

SM: TTP

9nl3

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Structure of R2 retrotransposon protein from Taeniopygia guttata initiating target-primed reverse transcription

SM: TTP

9pck

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Human DNA Polymerase Gamma-RNA-DNA Primer-Template Complex with Incoming ATP

SM: TTP

9sby

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-14

SM: ATP

9pvv

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RNA polymerase II elongation complex with dC at +1 site, 8-oxo-GTP bound in A-site.

SM: 8GT

9q10

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Human telomerase catalytic core with shelterin protein TPP1, dTpNHpp and DNA primer ending in AGGG

SM: 1FZ

9q11

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Human telomerase catalytic core with shelterin protein TPP1, BIBR1532, dTpNHpp and DNA primer ending in AGGG

SM: 1FZ

9q16

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Human telomerase catalytic core with shelterin protein TPP1, dGpNHpp and DNA primer ending in TTAG

SM: XG4

9q17

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Class I (T1D0+) of Human telomerase catalytic core with shelterin protein TPP1, BIBR1532, dGpNHpp and DNA primer ending in TTAG

SM: XG4

9qeb

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CryoEM structure of transcribing RNA polymerase II elongation complex

SM: ATP

9r96

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Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a slipped 3-mer RNA (pppGpGpA) and GTP poised for catalysis (slipped pre-IC4)

SM: GTP