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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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Experimental technique Experimental resolution Molecular weight (kDa) Deposition date Molecule type Organism
Molecular weight (Da) Number of atoms
Number of interacting chains Pocket size SiteScore Dscore Exposure Enclosure Hydrophobicity Hydrophilicity Donor/Acceptor Volume RNA environment global RNA environment detailed RNA family global RNA family chains Only one non-redundant filter can be selected at a time
1215 RNA-SM complexes found
60 120 180
filters used:  Molecule type: RNA/Protein  
Structure of complex 9v26

9v26

Cryo- EM structure of 75S ribosome with A/P- & P/E- tRNAs from Entamoeba histolytica bound to antibiotic paromomycin

SM: PAR

Structure of complex 9v29

9v29

Cryo- EM structure of small subunit (body) of 75S ribosome with A/P- & P/E- tRNAs from Entamoeba histolytica bound to antibiotic paromomycin

SM: PAR

Structure of complex 9vxm

9vxm

Human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs

SM: NAD NMY NMY NMY NMY NMY NMY NMY NMY SPM

Structure of complex 9vxn

9vxn

Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs

SM: NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY NMY

Structure of complex 9xe6

9xe6

Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 10-bp RNA product and incorporated 2FC

SM: 2KH

Structure of complex 9xe7

9xe7

Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 10-bp RNA product and incorporated cytidine

SM: 2KH

Structure of complex 9xe9

9xe9

Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 15-bp RNA product

SM: 2KH

Structure of complex 9xec

9xec

Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 9-bp RNA product

SM: 2KH

Structure of complex 9z2n

9z2n

CryoEM structure of human NSUN2(C271A) with SAH cross-linked to tRNA Lys(CTT) (D-arm conformation)

SM: SAH

Structure of complex 9z2o

9z2o

CryoEM structure of human NSUN2(C271A) with SAH cross-linked to tRNA Lys(CTT) (No D-arm conformation)

SM: SAH

Structure of complex 9z2r

9z2r

CryoEM structure of human NSUN2 with tRNA Lys(CTT) and SFG (D-arm conformation)

SM: SFG

Structure of complex 9z2t

9z2t

CryoEM structure of human NSUN2 with tRNA Lys(CTT) and SFG (No D-arm conformation)

SM: SFG

Structure of complex 9z2u

9z2u

CryoEM structure of human NSUN2(C271A) with SAH cross-linked to tRNA Lys(TTT) (D-arm conformation)

SM: SAH

Structure of complex 9z2w

9z2w

CryoEM structure of human NSUN2(C271A) with SAH cross-linked to tRNA Lys(TTT) (No D-arm conformation)

SM: SAH

Structure of complex 9z3d

9z3d

CryoEM structure of human NSUN2(C271A) with SAH cross-linked to a pre-tRNA Leu(CAA) intron

SM: SAH