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Harnessing RIBOnucleic acid - Small molecules Structures

Illustration - complex

Complex 9uht

Legend

Pocket colors by molecule type

 RNA

 Protein

 DNA

These colors appear when a pocket is selected (the structure fades to show the pocket surface). Colors from the molecule-type palette (RNA / protein / DNA).

System information

Experimental technique Electron Microscopy
Experimental resolution 2.89
System mass 322.60 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Betacoronavirus
RCSB PDB Entry 9uht
Equivalence Class NR_all_36715.2
BGSU version: 4.52

Pockets List

Legend

Cell colors for SiteScore and D Score:

 Favourable

 Intermediate

 Unfavourable

 Not available

ScoreThresholdMeaning
SiteScore< 0.8Non-drug binding site
SiteScore0.8 – 1.0Potential drug binding site
SiteScore> 1.0Promising binding site
D Score< 0.83Undruggable
D Score0.83 – 0.98Difficult
D Score> 0.98Druggable

Tick a pocket below to highlight it in the 3D structure above.

Compound GNP
Residue . / 1003
Chain M / A
Non-redundant False
Interacting RNA chains H/H
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains H/H: unknown
RNA family global unknown
Volume 429.44 Å3
Hydrophobicity 0.262
Hydrophilicity 1.630
Buriedness 0.899
Don/acc character 1.065
SiteScore 1.134
D Score 0.948
Kd