Complex 9vxn
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.51 |
| System mass | 3857.73 kDa |
| Deposition year | 2025 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Homo |
| RCSB PDB Entry | 9vxn |
| Equivalence Class |
NR_all_65061.63,
NR_all_46995.72,
NR_all_52752.59,
NR_all_17351.8
BGSU version: 4.49 |
| Compound | NMY |
| Residue | . / 5378 |
| Chain | VM / L5 |
| Non-redundant | True |
| Interacting RNA chains | C/L8, A/L5 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | A/L5: rRNA, C/L8: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5379 |
| Chain | WM / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5380 |
| Chain | XM / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5381 |
| Chain | YM / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5382 |
| Chain | ZM / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5383 |
| Chain | AN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5384 |
| Chain | BN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5385 |
| Chain | CN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5386 |
| Chain | DN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5387 |
| Chain | EN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5388 |
| Chain | FN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5, BC/u |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/L5: rRNA, BC/u: tRNA |
| RNA family global | multiple |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 5389 |
| Chain | GN / L5 |
| Non-redundant | True |
| Interacting RNA chains | A/L5 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | A/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 202 |
| Chain | KN / L7 |
| Non-redundant | True |
| Interacting RNA chains | B/L7, A/L5 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/L5: rRNA, B/L7: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 1902 |
| Chain | HO / S2 |
| Non-redundant | True |
| Interacting RNA chains | TA/S2 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | TA/S2: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 1945 |
| Chain | YP / S2 |
| Non-redundant | True |
| Interacting RNA chains | TA/S2 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | TA/S2: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 1966 |
| Chain | TQ / S2 |
| Non-redundant | True |
| Interacting RNA chains | TA/S2 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | TA/S2: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | NMY |
| Residue | . / 1975 |
| Chain | CR / S2 |
| Non-redundant | True |
| Interacting RNA chains | A/L5, TA/S2 |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/L5: rRNA, TA/S2: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |