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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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54 RNA-SM complexes found
Structure of complex 1i2y

1i2y

1.66 A STRUCTURE OF A-DUPLEX WITH BULGED ADENOSINE, SPERMINE FORM

SM: SPM

Structure of complex 1ofx

1ofx

CRYSTAL STRUCTURE OF AN OKAZAKI FRAGMENT AT 2 ANGSTROMS RESOLUTION

SM: SPM

Structure of complex 216d

216d

CRYSTAL STRUCTURES OF THE B-FORM DNA-RNA CHIMER (5'-D(*IP*)-R(*CP*)-D(*IP*CP*IP*CP*IP*C)-3') COMPLEXED WITH DISTAMYCIN

SM: DMY

Structure of complex 7m7m

7m7m

Human DNA Pol eta with rA-ended primer and dAMPNPP

SM: DZ4

Structure of complex 217d

217d

CRYSTAL STRUCTURES OF THE B-FORM DNA-RNA CHIMER (5'-D(*IP*)-R(*CP*)-D(*IP*)-R(*CP*)-D(*IP*CP*IP*C)-3') COMPLEXED WITH DISTAMYCIN

SM: DMY

Structure of complex 248d

248d

CRYSTAL STRUCTURES OF AN A-FORM DUPLEX WITH SINGLE-ADENOSINE BULGES AND A CONFORMATIONAL BASIS FOR SITE SPECIFIC RNA SELF-CLEAVAGE

SM: SPM

Structure of complex 4bwm

4bwm

KlenTaq mutant in complex with a RNA/DNA hybrid

SM: DCT

Structure of complex 4khu

4khu

Ternary complex of rb69 mutant L415F with a ribonucleotide at -1 position

SM: TTP

Structure of complex 4ki4

4ki4

Ternary complex of rb69 mutant L415F with ribonucleotides at 0 and -1 position

SM: TTP

Structure of complex 4ki6

4ki6

Ternary complex of rb69 mutant l415f with ribonucleotides at -1 and -2 position

SM: TTP

Structure of complex 5bs3

5bs3

Crystal Structure of S.A. gyrase in complex with Compound 7

SM: WCP

Structure of complex 7m7r

7m7r

Human DNA Pol eta S113A with rA-ended primer and dAMPNPP

SM: DZ4

Structure of complex 6cvo

6cvo

Human Aprataxin (Aptx) bound to nicked RNA-DNA, AMP and Zn product complex

SM: AMP AMP

Structure of complex 6cvp

6cvp

Human Aprataxin (Aptx) R199H bound to RNA-DNA, AMP and Zn product complex

SM: AMP AMP

Structure of complex 6cvq

6cvq

Human Aprataxin (Aptx) H201Q bound to RNA-DNA, AMP and Zn product complex

SM: AMP AMP

Structure of complex 6cvr

6cvr

Human Aprataxin (Aptx) S242N bound to RNA-DNA, AMP and Zn product complex

SM: AMP AMP

Structure of complex 6cvt

6cvt

Human Aprataxin (Aptx) V263G bound to RNA-DNA, AMP and Zn product complex

SM: AMP AMP

Structure of complex 6e53

6e53

Structure of TERT in complex with a novel telomerase inhibitor

SM: HUV

Structure of complex 7m89

7m89

Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 0 s

SM: DTP

Structure of complex 6n9u

6n9u

Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) interacting with primase domains of two gp4 subunits bound to an RNA/DNA hybrid and dTTP (from LagS1)

SM: TTP

Structure of complex 6n9v

6n9v

Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS1)

SM: TTP

Structure of complex 6n9w

6n9w

Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS2)

SM: TTP

Structure of complex 6n9x

6n9x

Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS3)

SM: TTP

Structure of complex 6p1s

6p1s

Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated AMP

SM: ATP

Structure of complex 6p1u

6p1u

Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated CMP

SM: CTP

Structure of complex 6usr

6usr

Telomerase Reverse Transcriptase ternary complex, TERT:DNA:dGpCpp

SM: G2P

Structure of complex 7kul

7kul

DNA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7m8a

7m8a

Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 40 s

SM: DTP

Structure of complex 7m8b

7m8b

Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 140 s

SM: DTP

Structure of complex 7m8c

7m8c

Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 230 s

SM: DTP

Structure of complex 7m8d

7m8d

Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 300 s

SM: DTP

Structure of complex 8e8d

8e8d

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 60s

SM: DGT

Structure of complex 8e8e

8e8e

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 90s

SM: DGT

Structure of complex 8e8f

8e8f

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 120s

SM: DGT

Structure of complex 8e8g

8e8g

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 180s

SM: DGT

Structure of complex 8e86

8e86

Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mn2+

SM: XG4

Structure of complex 8e87

8e87

Human DNA polymerase eta-DNA-rA-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8e88

8e88

Human DNA polymerase eta-DNA-rU-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8e8b

8e8b

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion

SM: DGT

Structure of complex 8e8c

8e8c

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 30s

SM: DGT

Structure of complex 8e85

8e85

Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mn2+

SM: XG4

Structure of complex 8e8h

8e8h

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 300s

SM: DGT

Structure of complex 8e8j

8e8j

Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8e8k

8e8k

Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 9gzm

9gzm

Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3)

SM: GTP

Structure of complex 9gzn

9gzn

Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFB2M/DNA/RNA) without TFAM; and with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3-TFAM)

SM: GTP

Structure of complex 9k7r

9k7r

Crystal structure of DNA/RNA duplex obtained using the counter diffusion method on Earth (K form)

SM: SPM

Structure of complex 9kkz

9kkz

Crystal structure of DNA/RNA duplex obtained using the counter diffusion method on Earth (Na form)

SM: SPM

Structure of complex 9kl1

9kl1

Crystal structure of DNA/RNA duplex obtained using the counter diffusion method in space (Na form)

SM: SPM

Structure of complex 9r96

9r96

Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a slipped 3-mer RNA (pppGpGpA) and GTP poised for catalysis (slipped pre-IC4)

SM: GTP

Structure of complex 9u6z

9u6z

INTERACTION BETWEEN A FLUOROQUINOLONE DERIVATIVE AND RNAS WITH A SINGLE BULGE

SM: 53D

Structure of complex 9u70

9u70

INTERACTION BETWEEN A FLUOROQUINOLONE DERIVATIVE AND RNAS WITH A SINGLE BULGE

SM: 53D

Structure of complex 9vuo

9vuo

Crystal structure of the DNA/RNA hybrid with Tica

SM: A1ETT

Structure of complex 9yd4

9yd4

RNA primer non-enzymatic extension product with DNA substrate

SM: A1CWA A1CWA