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RNA-SM complexes

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System Properties

Experimental technique Experimental resolution Molecular weight (kDa) Deposition date Molecule type Organism With MD simulation With equivalence class

Ligand Properties

Molecular weight (Da) Number of atoms Lipinski rule of 5 Veber Pfizer 3/75

Pocket Properties

Number of interacting chains Pocket size SiteScore Dscore Exposure Enclosure Hydrophobicity Hydrophilicity Donor/Acceptor Volume RNA environment global RNA environment detailed RNA family global RNA family chains With binding affinity values Only one non-redundant filter can be selected at a time Non-redundant only Non-redundant only (RNA)

206 RNA-SM complexes found

RNA-SM complexes per page

60 120 180

filters used: RNA environment global: RNA/DNA/Protein

9sbv

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-11

SM: ATP

9sbw

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-12

SM: ATP

9sbx

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-13

SM: ATP

9sbz

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-15

SM: ATP

9sc0

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-16

SM: ATP

9sc1

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-17

SM: ATP

9sc2

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-18

SM: ATP

9sc3

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-19

SM: ATP

9sc4

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Structure of Yeast RNA polymerase II elongation complex with ATP frame-20

SM: ATP

9shy

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Cryo-EM structure of the catalytic core of human telomerase at the initiation state of the repeat addition cycle

SM: 1GC

9shz

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Cryo-EM structure of the catalytic core of human telomerase at the elongation state of the repeat addition cycle

SM: A1ACD

9si0

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Cryo-EM structure of the catalytic core of human telomerase at the pre-termination state of the repeat addition cycle

SM: 1GC

9sv6

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CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1

SM: ATP

9ucx

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Cryo-EM structure of R2Tg bound to template RNA and target DNA in the target-primed reverse transcription initiation state (state 1)

SM: TTP

9ucy

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Cryo-EM structure of the R2Tg retrotransposon in complex with R2RNA and rDNA in the initiating target-primed reverse transcription state (top strand cleaved)

SM: TTP

9ucz

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Cryo-EM structure of the R2Tg retrotransposon in complex with R2RNA and rDNA in the initiating target-primed reverse transcription state (ZF3/2 disordered)

SM: TTP

9ud1

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Cryo-EM structure of STITCHR (R2Tg and Cas9 nickase) bound to guide RNA, template RNA, and target DNA in the target-primed reverse transcription initiation state

SM: TTP

9ukt

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CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C-U and CTP, -1 dC in the template DNA strand

SM: CTP

9vma

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Cryo-EM structure of substrate-bound DRT9 hexamer complex

SM: DTP

9ymu

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De novo initial transcribing RNA polymerase with 2-mer RNA and bound CTP / Michaelis complex (RPitc2+CTP)

SM: CTP

9ynp

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Cryo-EM structure of Escherichia coli transcription initiation complex with GpA and pseudouridimycin (PUM)

SM: PUM

9ynq

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Cryo-EM structure of Escherichia coli transcription initiation complex with GpA and des-hydroxy pseudouridimycin (des-hydroxy PUM)

SM: A1CYH

9zp1

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E. coli RNA polymerase elongation complex containing the unnatural dP:Z*TP base pair in a trigger-loop-open conformation (a)

SM: A1C49

9zp2

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E. coli RNA polymerase elongation complex containing the unnatural dP:Z*TP base pair in a trigger-loop-open conformation (b)

SM: A1C49

9zp3

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E. coli RNA polymerase elongation complex containing the unnatural dP:Z*TP base pair in a trigger-loop-closed conformation

SM: A1C49

9zp4

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E. coli RNA polymerase elongation complex containing the unnatural dZ:PTP base pair in a trigger-loop-closed conformation

SM: A1C5A