HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9vma

System information

Experimental technique Electron Microscopy
Experimental resolution 3.46
System mass 722.57 kDa
Deposition year 2025
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 9vma
Reference Han Jie, Liu Bin, Tang Jingjing, Zhang Shuqin, Wang Xiaoshen, Li Xuzichao, Zhang Qian, Liu Zhikun, Wang Wanyao, Liu Yingcan, Zhou Ruimin, Yin Hang, Wei Yong, Li Zhuang, Zhang Minjie, Deng Zengqin, Zhang Heng. . Non-coding RNA mediates the defense-associated reverse transcriptase (DRT) anti-phage oligomerization transition The EMBO Journal
Equivalence Class NR_all_73630.1
BGSU version: 4.48

Compound DTP
Residue . / 501
Chain S / A
Non-redundant True
Interacting RNA chains G/G
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains G/G: unknown
RNA family global unknown
Volume 518.96 Å3
Hydrophobicity 0.324
Hydrophilicity 1.402
Buriedness 0.785
Don/acc character 0.527
SiteScore 1.058
D Score 0.954
Kd