HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound A1CYH

Identifiers

  • Canonical SMILES:
    NC(=N)NCC(=O)N[C@@H](CCC(N)=O)C(=O)NC[C@H]1O[C@H]([C@H](O)[C@@H]1O)C2=CNC(=O)NC2=O
  • IUPAC name:
    (1S)-1,4-anhydro-5-[(N-carbamimidoylglycyl-L-glutaminyl)amino]-5-deoxy-1-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-D-ribitol
  • InChi:
    InChI=1S/C17H26N8O8/c18-9(26)2-1-7(24-10(27)5-22-16(19)20)15(31)21-4-8-11(28)12(29)13(33-8)6-3-23-17(32)25-14(6)30/h3,7-8,11-13,28-29H,1-2,4-5H2,(H2,18,26)(H,21,31)(H,24,27)(H4,19,20,22)(H2,23,25,30,32)/t7-,8+,11+,12+,13-/m0/s1
  • InChiKey:
    XXNQCAOEESDBST-YFKLLHAASA-N

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
9ynq Oct. 11, 2025 Anwar Avraz F., You Linlin, Degen David, Burns Katie J., Garza Michael J., Ebright Richard H., Del Valle Juan R.. . Solid-Phase Synthesis and Biological Evaluation of Des-hydroxy Pseudouridimycin Analogs ACS Medicinal Chemistry Letters

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 470.19 g/mol
HBA 9
HBD 10
HBA + HBD
AlogP -5.43
TPSA 278.60
RB 10

Radar chart