HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5wf0

System information

Experimental technique Electron Microscopy
Experimental resolution 3.60
System mass 2297.69 kDa
Deposition year 2017
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 5wf0
Reference Fislage Marcus, Zhang Jingji, Brown Zuben Patrick, Mandava Chandra Sekhar, Sanyal Suparna, Ehrenberg Måns, Frank Joachim. . Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A Nucleic Acids Research

Compound FME
Residue . / 3001
Chain HB / A
Non-redundant False
Interacting RNA chains A/A
Volume 517.24 Å3
Hydrophobicity 0.521
Hydrophilicity 1.440
Buriedness 0.733
Don/acc character 0.764
SiteScore 1.174
D Score 0.911

Compound PHE
Residue . / 401
Chain LGB / z
Non-redundant True
Interacting RNA chains FB/y
Volume 430.81 Å3
Hydrophobicity 0.271
Hydrophilicity 1.419
Buriedness 0.878
Don/acc character 0.724
SiteScore 1.121
D Score 1.004