Complex 5wf0
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 3.60 |
| System mass | 2297.69 kDa |
| Deposition year | 2017 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 5wf0 |
| Reference | Fislage Marcus, Zhang Jingji, Brown Zuben Patrick, Mandava Chandra Sekhar, Sanyal Suparna, Ehrenberg Måns, Frank Joachim. . Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A Nucleic Acids Research |
| Equivalence Class |
NR_all_83717.186,
NR_all_19951.101
BGSU version: 4.49 |
| Compound | FME |
| Residue | . / 3001 |
| Chain | HB / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 517.24 Å3 |
| Hydrophobicity | 0.521 |
| Hydrophilicity | 1.440 |
| Buriedness | 0.733 |
| Don/acc character | 0.764 |
| SiteScore | 1.174 |
| D Score | 0.911 |
| Kd | — |
| Compound | PHE |
| Residue | . / 401 |
| Chain | LGB / z |
| Non-redundant | True |
| Interacting RNA chains | FB/y |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | FB/y: tRNA |
| RNA family global | tRNA |
| Volume | 430.81 Å3 |
| Hydrophobicity | 0.271 |
| Hydrophilicity | 1.419 |
| Buriedness | 0.878 |
| Don/acc character | 0.724 |
| SiteScore | 1.121 |
| D Score | 1.004 |
| Kd | — |