HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9fxo

System information

Experimental technique Electron Microscopy
Experimental resolution 2.25
System mass 3633.51 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Leishmania
RCSB PDB Entry 9fxo

Compound PAR
Residue . / 1978
Chain GJ / L1
Non-redundant True
Interacting RNA chains A/L1
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1728
Chain EO / L2
Non-redundant True
Interacting RNA chains B/L2
Volume 657.53 Å3
Hydrophobicity 0.428
Hydrophilicity 1.004
Buriedness 0.728
Don/acc character 1.451
SiteScore 1.027
D Score 1.049

Compound PAR
Residue . / 1729
Chain FO / L2
Non-redundant True
Interacting RNA chains YA/S1, B/L2
Volume 212.66 Å3
Hydrophobicity 0.157
Hydrophilicity 1.136
Buriedness 0.712
Don/acc character 1.083
SiteScore 0.814
D Score 0.554

Compound PAR
Residue . / 208
Chain UP / L7
Non-redundant True
Interacting RNA chains G/L7, A/L1
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 2445
Chain OW / S1
Non-redundant True
Interacting RNA chains YA/S1
Volume 167.38 Å3
Hydrophobicity 0.064
Hydrophilicity 1.084
Buriedness 0.700
Don/acc character 1.174
SiteScore 0.604
D Score 0.497

Compound PAR
Residue . / 2446
Chain PW / S1
Non-redundant True
Interacting RNA chains YA/S1
Volume 50.76 Å3
Hydrophobicity 0.000
Hydrophilicity 1.098
Buriedness 0.587
Don/acc character 1.556
SiteScore 0.447
D Score 0.320