HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6ysi

System information

Experimental technique Electron Microscopy
Experimental resolution 2.50
System mass 1387.93 kDa
Deposition year 2020
Molecule type RNA/Protein
# RNA entities 1
Organism Acinetobacter
RCSB PDB Entry 6ysi
Reference Nicholson David, Edwards Thomas A., O'Neill Alex J., Ranson Neil A.. . Structure of the 70S Ribosome from the Human Pathogen Acinetobacter baumannii in Complex with Clinically Relevant Antibiotics Structure

Compound T1C
Residue . / 3160
Chain JG / 1
Non-redundant True
Interacting RNA chains AA/1
Volume 318.30 Å3
Hydrophobicity 0.406
Hydrophilicity 0.979
Buriedness 0.757
Don/acc character 1.138
SiteScore 0.720
D Score 0.650

Compound T1C
Residue . / 201
Chain KG / 5
Non-redundant True
Interacting RNA chains BA/5, AA/1
Volume 358.44 Å3
Hydrophobicity 0.315
Hydrophilicity 1.791
Buriedness 0.754
Don/acc character 0.337
SiteScore 0.823
D Score 0.533

Compound T1C
Residue . / 205
Chain OG / 5
Non-redundant True
Interacting RNA chains BA/5, AA/1
Volume 465.11 Å3
Hydrophobicity 0.016
Hydrophilicity 1.455
Buriedness 0.670
Don/acc character 1.022
SiteScore 0.981
D Score 0.868