HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5we6

System information

Experimental technique Electron Microscopy
Experimental resolution 3.40
System mass 2277.35 kDa
Deposition year 2017
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 5we6
Reference Fislage Marcus, Zhang Jingji, Brown Zuben Patrick, Mandava Chandra Sekhar, Sanyal Suparna, Ehrenberg Måns, Frank Joachim. . Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A Nucleic Acids Research

Compound FME
Residue . / 3001
Chain HB / A
Non-redundant False
Interacting RNA chains A/A
Volume 657.19 Å3
Hydrophobicity 0.344
Hydrophilicity 1.068
Buriedness 0.737
Don/acc character 1.998
SiteScore 1.176
D Score 1.034

Compound PHE
Residue . / 101
Chain WAA / y
Non-redundant True
Interacting RNA chains FB/y
Volume 456.88 Å3
Hydrophobicity 1.094
Hydrophilicity 1.173
Buriedness 0.881
Don/acc character 0.790
SiteScore 1.122
D Score 1.086