HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5el7

System information

Experimental technique X-ray
Experimental resolution 3.15
System mass 4556.59 kDa
Deposition year 2015
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 5el7
Reference Rozov Alexey, Demeshkina Natalia, Khusainov Iskander, Westhof Eric, Yusupov Marat, Yusupova Gulnara. . Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code Nature Communications

Compound PAR
Residue . / 1749
Chain XI / 13
Non-redundant True
Interacting RNA chains A/13
Volume 324.48 Å3
Hydrophobicity 0.095
Hydrophilicity 1.106
Buriedness 0.698
Don/acc character 2.248
SiteScore 1.120
D Score 0.960

Compound PAR
Residue . / 1691
Chain GHA / 1G
Non-redundant True
Interacting RNA chains DB/1G
Volume 457.56 Å3
Hydrophobicity 0.069
Hydrophilicity 1.071
Buriedness 0.649
Don/acc character 2.290
SiteScore 1.117
D Score 0.980