Complex 5br8
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.40 |
| System mass | 794.73 kDa |
| Deposition year | 2015 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermus |
| RCSB PDB Entry | 5br8 |
| Equivalence Class |
NR_all_65795.87
BGSU version: 4.49 |
| Compound | PAR |
| Residue | . / 1601 |
| Chain | V / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 92.27 Å3 |
| Hydrophobicity | 0.115 |
| Hydrophilicity | 0.839 |
| Buriedness | 0.577 |
| Don/acc character | 2.641 |
| SiteScore | 0.613 |
| D Score | 0.570 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1602 |
| Chain | W / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 579.67 Å3 |
| Hydrophobicity | 0.011 |
| Hydrophilicity | 1.656 |
| Buriedness | 0.747 |
| Don/acc character | 1.140 |
| SiteScore | 1.033 |
| D Score | 0.849 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1603 |
| Chain | X / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 399.60 Å3 |
| Hydrophobicity | 0.143 |
| Hydrophilicity | 1.354 |
| Buriedness | 0.751 |
| Don/acc character | 1.796 |
| SiteScore | 0.642 |
| D Score | 0.706 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1604 |
| Chain | Y / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 328.59 Å3 |
| Hydrophobicity | 0.119 |
| Hydrophilicity | 1.192 |
| Buriedness | 0.704 |
| Don/acc character | 2.133 |
| SiteScore | 0.901 |
| D Score | 0.842 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1605 |
| Chain | Z / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 645.18 Å3 |
| Hydrophobicity | 0.010 |
| Hydrophilicity | 1.766 |
| Buriedness | 0.757 |
| Don/acc character | 0.741 |
| SiteScore | 1.040 |
| D Score | 0.819 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1606 |
| Chain | AA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 56.25 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.976 |
| Buriedness | 0.896 |
| Don/acc character | 1.206 |
| SiteScore | 0.885 |
| D Score | 0.324 |
| Kd | — |