HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5br8

System information

Experimental technique X-ray
Experimental resolution 3.40
System mass 794.73 kDa
Deposition year 2015
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 5br8

Compound PAR
Residue . / 1601
Chain V / A
Non-redundant False
Interacting RNA chains A/A
Volume 92.27 Å3
Hydrophobicity 0.115
Hydrophilicity 0.839
Buriedness 0.577
Don/acc character 2.641
SiteScore 0.613
D Score 0.570

Compound PAR
Residue . / 1602
Chain W / A
Non-redundant True
Interacting RNA chains A/A
Volume 579.67 Å3
Hydrophobicity 0.011
Hydrophilicity 1.656
Buriedness 0.747
Don/acc character 1.140
SiteScore 1.033
D Score 0.849

Compound PAR
Residue . / 1603
Chain X / A
Non-redundant False
Interacting RNA chains A/A
Volume 399.60 Å3
Hydrophobicity 0.143
Hydrophilicity 1.354
Buriedness 0.751
Don/acc character 1.796
SiteScore 0.642
D Score 0.706

Compound PAR
Residue . / 1604
Chain Y / A
Non-redundant False
Interacting RNA chains A/A
Volume 328.59 Å3
Hydrophobicity 0.119
Hydrophilicity 1.192
Buriedness 0.704
Don/acc character 2.133
SiteScore 0.901
D Score 0.842

Compound PAR
Residue . / 1605
Chain Z / A
Non-redundant False
Interacting RNA chains A/A
Volume 645.18 Å3
Hydrophobicity 0.010
Hydrophilicity 1.766
Buriedness 0.757
Don/acc character 0.741
SiteScore 1.040
D Score 0.819

Compound PAR
Residue . / 1606
Chain AA / A
Non-redundant False
Interacting RNA chains A/A
Volume 56.25 Å3
Hydrophobicity 0.000
Hydrophilicity 1.976
Buriedness 0.896
Don/acc character 1.206
SiteScore 0.885
D Score 0.324