Complex 4x66
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.45 |
| System mass | 785.90 kDa |
| Deposition year | 2014 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermus |
| RCSB PDB Entry | 4x66 |
| Reference | Choi Junhong, Ieong Ka-Weng, Demirci Hasan, Chen Jin, Petrov Alexey, Prabhakar Arjun, O'Leary Seán E, Dominissini Dan, Rechavi Gideon, Soltis S Michael, Ehrenberg Måns, Puglisi Joseph D. . N6-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics Nature Structural & Molecular Biology |
| Equivalence Class |
NR_all_65795.87
BGSU version: 4.49 |
| Compound | PAR |
| Residue | . / 1601 |
| Chain | X / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 296.70 Å3 |
| Hydrophobicity | 0.293 |
| Hydrophilicity | 1.015 |
| Buriedness | 0.673 |
| Don/acc character | 1.488 |
| SiteScore | 0.973 |
| D Score | 0.994 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1602 |
| Chain | Y / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 191.39 Å3 |
| Hydrophobicity | 0.135 |
| Hydrophilicity | 1.305 |
| Buriedness | 0.811 |
| Don/acc character | 2.214 |
| SiteScore | 0.709 |
| D Score | 0.531 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1603 |
| Chain | Z / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 517.59 Å3 |
| Hydrophobicity | 0.045 |
| Hydrophilicity | 1.562 |
| Buriedness | 0.793 |
| Don/acc character | 1.174 |
| SiteScore | 0.826 |
| D Score | 0.713 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1604 |
| Chain | AA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 621.52 Å3 |
| Hydrophobicity | 0.123 |
| Hydrophilicity | 1.161 |
| Buriedness | 0.707 |
| Don/acc character | 2.000 |
| SiteScore | 1.006 |
| D Score | 0.985 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1605 |
| Chain | BA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 431.84 Å3 |
| Hydrophobicity | 0.020 |
| Hydrophilicity | 2.347 |
| Buriedness | 0.789 |
| Don/acc character | 0.672 |
| SiteScore | 0.856 |
| D Score | 0.386 |
| Kd | — |
| Compound | PAR |
| Residue | . / 1606 |
| Chain | CA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 75.46 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.347 |
| Buriedness | 0.641 |
| Don/acc character | 1.087 |
| SiteScore | 0.800 |
| D Score | 0.486 |
| Kd | — |