Complex 4wt8
System information
Experimental technique | X-ray |
Experimental resolution | 3.40 |
System mass | 4460.70 kDa |
Deposition year | 2014 |
Molecule type | RNA/Protein |
# RNA entities | 8 |
Organism | Thermus |
RCSB PDB Entry | 4wt8 |
Reference | Amunts Alexey, Fiedorczuk Karol, Truong Thao T., Chandler Josephine, Greenberg E. Peter, Ramakrishnan V.. . Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics Journal of Molecular Biology |
Compound | 3V6 |
Residue | . / 3001 |
Chain | PD / C1 |
Non-redundant | True |
Interacting RNA chains | AC/C1, UA/C4 |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 3V6 |
Residue | . / 3001 |
Chain | RD / D1 |
Non-redundant | True |
Interacting RNA chains | EC/D4, LD/D1 |
Volume | 733.68 Å3 |
Hydrophobicity | 0.326 |
Hydrophilicity | 1.018 |
Buriedness | 0.688 |
Don/acc character | 1.363 |
SiteScore | 0.998 |
D Score | 1.021 |
Compound | PAR |
Residue | . / 1601 |
Chain | ND / Ab |
Non-redundant | False |
Interacting RNA chains | V/Ab |
Volume | 191.74 Å3 |
Hydrophobicity | 0.121 |
Hydrophilicity | 0.873 |
Buriedness | 0.645 |
Don/acc character | 1.369 |
SiteScore | 0.744 |
D Score | 0.719 |
Compound | PAR |
Residue | . / 1601 |
Chain | OD / Bb |
Non-redundant | False |
Interacting RNA chains | X/Bb |
Volume | 271.66 Å3 |
Hydrophobicity | 0.124 |
Hydrophilicity | 0.893 |
Buriedness | 0.636 |
Don/acc character | 1.560 |
SiteScore | 0.778 |
D Score | 0.762 |