Complex 4wt8
System information
Experimental technique | X-ray |
Experimental resolution | 3.40 |
System mass | 4460.70 kDa |
Deposition year | 2014 |
Molecule type | RNA/Protein |
# RNA entities | 8 |
Organism | Thermus |
RCSB PDB Entry | 4wt8 |
Reference | Amunts Alexey, Fiedorczuk Karol, Truong Thao T., Chandler Josephine, Greenberg E. Peter, Ramakrishnan V.. . Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics Journal of Molecular Biology |
Compound | 3V6 |
Residue | . / 3001 |
Chain | PD / C1 |
Non-redundant | True |
Interacting RNA chains | UA/C4, AC/C1 |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 3V6 |
Residue | . / 3001 |
Chain | RD / D1 |
Non-redundant | True |
Interacting RNA chains | LD/D1, EC/D4 |
Volume | 757.00 Å3 |
Hydrophobicity | 0.089 |
Hydrophilicity | 1.187 |
Buriedness | 0.679 |
Don/acc character | 3.129 |
SiteScore | 0.988 |
D Score | 0.961 |
Compound | PAR |
Residue | . / 1601 |
Chain | ND / Ab |
Non-redundant | False |
Interacting RNA chains | V/Ab |
Volume | 201.34 Å3 |
Hydrophobicity | 0.168 |
Hydrophilicity | 0.905 |
Buriedness | 0.653 |
Don/acc character | 3.096 |
SiteScore | 0.765 |
D Score | 0.741 |
Compound | PAR |
Residue | . / 1601 |
Chain | OD / Bb |
Non-redundant | False |
Interacting RNA chains | X/Bb |
Volume | 284.35 Å3 |
Hydrophobicity | 0.132 |
Hydrophilicity | 0.951 |
Buriedness | 0.637 |
Don/acc character | 2.714 |
SiteScore | 0.762 |
D Score | 0.737 |