HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4khp

System information

Experimental technique X-ray
Experimental resolution 3.10
System mass 770.16 kDa
Deposition year 2013
Molecule type RNA/Protein
# RNA entities 2
Organism Thermus
RCSB PDB Entry 4khp
Reference Tourigny David S., Fernández Israel S., Kelley Ann C., Vakiti Ramkrishna Reddy, Chattopadhyay Amit Kumar, Dorich Stéphane, Hanessian Stephen, Ramakrishnan V.. . Crystal Structure of a Bioactive Pactamycin Analog Bound to the 30S Ribosomal Subunit Journal of Molecular Biology

Compound PAR
Residue . / 1601
Chain W / A
Non-redundant False
Interacting RNA chains A/A
Volume 125.54 Å3
Hydrophobicity 0.057
Hydrophilicity 1.208
Buriedness 0.686
Don/acc character 0.841
SiteScore 0.625
D Score 0.488

Compound PAR
Residue . / 1605
Chain AA / A
Non-redundant True
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1607
Chain CA / A
Non-redundant True
Interacting RNA chains A/A
Volume 1458.44 Å3
Hydrophobicity 0.119
Hydrophilicity 1.203
Buriedness 0.755
Don/acc character 3.036
SiteScore 1.038
D Score 1.001