HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3c44

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 16.23 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3c44
Reference Freisz Séverine, Lang Kathrin, Micura Ronald, Dumas Philippe, Ennifar Eric. . Binding of Aminoglycoside Antibiotics to the Duplex Form of the HIV‐1 Genomic RNA Dimerization Initiation Site Angewandte Chemie International Edition

Compound PAR
Residue . / 24
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 663.36 Å3
Hydrophobicity 0.047
Hydrophilicity 1.251
Buriedness 0.701
Don/acc character 1.444
SiteScore 1.152
D Score 0.952

Compound PAR
Residue . / 24
Chain F / B
Non-redundant False
Interacting RNA chains A/A, B/B
Volume 516.56 Å3
Hydrophobicity 0.229
Hydrophilicity 0.951
Buriedness 0.715
Don/acc character 1.772
SiteScore 1.179
D Score 1.059