HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1fjg

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 789.32 kDa
Deposition year 2000
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 1fjg
Reference Carter Andrew P., Clemons William M., Brodersen Ditlev E., Morgan-Warren Robert J., Wimberly Brian T., Ramakrishnan V.. . Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics Nature
Equivalence Class NR_all_65795.87
BGSU version: 4.49

Compound PAR
Residue . / 1545
Chain W / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 102.90 Å3
Hydrophobicity 0.069
Hydrophilicity 0.942
Buriedness 0.593
Don/acc character 3.309
SiteScore 0.596
D Score 0.537
Kd

Compound SCM
Residue . / 1633
Chain ND / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 680.86 Å3
Hydrophobicity 0.148
Hydrophilicity 1.131
Buriedness 0.693
Don/acc character 1.357
SiteScore 1.147
D Score 0.987
Kd

Compound SRY
Residue . / 1634
Chain OD / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 185.56 Å3
Hydrophobicity 0.105
Hydrophilicity 0.947
Buriedness 0.678
Don/acc character 2.371
SiteScore 0.891
D Score 0.700
Kd