HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound U3H

Identifiers

  • Canonical SMILES:
    O[C@@H]1C[C@@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)O[C@H]1N2C=CC(=O)N[C@H]2O
  • IUPAC name:
    (2R)-1-{3-deoxy-5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-2-hydroxy-2,3-dihydropyrimidin-4(1H)-one
  • InChi:
    InChI=1S/C9H17N2O14P3/c12-6-3-5(23-8(6)11-2-1-7(13)10-9(11)14)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8-9,12,14H,3-4H2,(H,10,13)(H,18,19)(H,20,21)(H2,15,16,17)/t5-,6+,8+,9+/m0/s1
  • InChiKey:
    CVEDUOUYNXHQBA-HIORRCEOSA-N

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
1n38 Oct. 25, 2002 Tao Yizhi, Farsetta Diane L., Nibert Max L., Harrison Stephen C.. . RNA Synthesis in a Cage—Structural Studies of Reovirus Polymerase λ3 Cell

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 469.99 g/mol
HBA 11
HBD 7
HBA + HBD
AlogP -1.97
TPSA 241.85
RB 8

Radar chart