HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound RTP

Identifiers

  • Canonical SMILES:
    NC(=O)c1ncn(n1)[C@@H]2O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O
  • IUPAC name:
    1-{5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-ribofuranosyl}-1H-1,2,4-triazole-3-carboxamide
  • InChi:
    InChI=1S/C8H15N4O14P3/c9-6(15)7-10-2-12(11-7)8-5(14)4(13)3(24-8)1-23-28(19,20)26-29(21,22)25-27(16,17)18/h2-5,8,13-14H,1H2,(H2,9,15)(H,19,20)(H,21,22)(H2,16,17,18)/t3-,4-,5-,8-/m1/s1
  • InChiKey:
    MMJOCKKLRMRSEQ-AFCXAGJDSA-N
  • SMARTS:
    [#7]-[#6](=[#8])-[#6]1:[#7]:[#6]:[#7](:[#7]:1)-[#6@@H]1-[#8]-[#6@H](-[#6]-[#8]-[#15@](-[#8])(=[#8])-[#8]-[#15@@](-[#8])(=[#8])-[#8]-[#15](-[#8])(-[#8])=[#8])-[#6@@H](-[#8])-[#6@H]-1-[#8]

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
2e9r Jan. 26, 2007 Ferrer-Orta Cristina, Arias Armando, Pérez-Luque Rosa, Escarmís Cristina, Domingo Esteban, Verdaguer Nuria. . Sequential structures provide insights into the fidelity of RNA replication Proceedings of the National Academy of Sciences

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 483.98 g/mol
HBA 12
HBD 7
HBA + HBD
AlogP -2.66
TPSA 283.31
RB 9

Radar chart