HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound CSG

Identifiers

  • Canonical SMILES:
    N[C@@H]1[C@H](O)[C@@H](CO[P@@](O)(=O)O[P@](O)(=O)O[P](O)(O)=O)O[C@H]1N2C=CC(=NC2=O)N
  • IUPAC name:
    2'-amino-2'-deoxycytidine 5'-(tetrahydrogen triphosphate)
  • InChi:
    InChI=1S/C9H17N4O13P3/c10-5-1-2-13(9(15)12-5)8-6(11)7(14)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,14H,3,11H2,(H,19,20)(H,21,22)(H2,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
  • InChiKey:
    WNVZQYHBHSLUHJ-XVFCMESISA-N

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
3h5x April 22, 2009 Zamyatkin Dmitry F., Parra Francisco, Machín Ángeles, Grochulski Pawel, Ng Kenneth K.-S.. . Binding of 2′-Amino-2′-Deoxycytidine-5′-Triphosphate to Norovirus Polymerase Induces Rearrangement of the Active Site Journal of Molecular Biology

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 482.00 g/mol
HBA 12
HBD 7
HBA + HBD
AlogP -2.25
TPSA 276.21
RB 8

Radar chart