HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9v4v

System information

Experimental technique X-ray
Experimental resolution 3.12
System mass 23.17 kDa
Deposition year 2025
Molecule type RNA
# RNA entities 1
Organism Staphylococcus
RCSB PDB Entry 9v4v
Reference Li Hongcheng, Shen Xin, Xu Xiaochen, Tai Xiaoqing, He Mengqi, Zhang Jinzhu, Ren Aiming. . Ligand specificity and adaptability revealed by the first Guanine-II riboswitch tertiary structure Nucleic Acids Research
Equivalence Class NR_all_84306.1
BGSU version: 4.49

Compound 7PD
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 328.59 Å3
Hydrophobicity 0.337
Hydrophilicity 1.299
Buriedness 0.814
Don/acc character 0.848
SiteScore 1.182
D Score 0.947
Kd