HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9t6h

System information

Experimental technique Electron Microscopy
Experimental resolution 2.40
System mass 2142.07 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Francisella
RCSB PDB Entry 9t6h
Reference Klima Martin, Silhan Jan, Pavlik Pavla, Hercik Kamil, Boura Evzen. . Structure of the hibernating Francisella tularensis ribosome and mechanistic insights into its inhibition by antibiotics Nucleic Acids Research

Compound CLM
Residue . / 3019
Chain PF / A
Non-redundant True
Interacting RNA chains A/A
Volume 509.36 Å3
Hydrophobicity 0.202
Hydrophilicity 1.167
Buriedness 0.702
Don/acc character 1.201
SiteScore 1.153
D Score 0.981

Compound LLL
Residue . / 2901
Chain BB / A
Non-redundant True
Interacting RNA chains A/A
Volume 62.08 Å3
Hydrophobicity 0.185
Hydrophilicity 0.760
Buriedness 0.579
Don/acc character 3.423
SiteScore 0.634
D Score 0.411

Compound LLL
Residue . / 3021
Chain RF / A
Non-redundant True
Interacting RNA chains A/A
Volume 238.73 Å3
Hydrophobicity 0.084
Hydrophilicity 1.363
Buriedness 0.804
Don/acc character 1.682
SiteScore 0.902
D Score 0.570

Compound LLL
Residue . / 3022
Chain SF / A
Non-redundant True
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound LLL
Residue . / 3023
Chain TF / A
Non-redundant True
Interacting RNA chains A/A
Volume 197.91 Å3
Hydrophobicity 0.009
Hydrophilicity 0.766
Buriedness 0.520
Don/acc character 2.426
SiteScore 1.083
D Score 1.002

Compound LLL
Residue . / 3024
Chain UF / A
Non-redundant True
Interacting RNA chains A/A
Volume 251.76 Å3
Hydrophobicity 0.085
Hydrophilicity 1.378
Buriedness 0.768
Don/acc character 2.283
SiteScore 0.722
D Score 0.509

Compound LLL
Residue . / 1615
Chain OG / a
Non-redundant True
Interacting RNA chains FA/a
Volume 108.73 Å3
Hydrophobicity 0.444
Hydrophilicity 0.796
Buriedness 0.589
Don/acc character 2.828
SiteScore 0.758
D Score 0.564

Compound LLL
Residue . / 1616
Chain PG / a
Non-redundant True
Interacting RNA chains FA/a
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound LLL
Residue . / 1617
Chain QG / a
Non-redundant True
Interacting RNA chains FA/a
Volume 767.29 Å3
Hydrophobicity 0.180
Hydrophilicity 1.049
Buriedness 0.751
Don/acc character 2.316
SiteScore 1.181
D Score 1.044

Compound LLL
Residue . / 1618
Chain RG / a
Non-redundant True
Interacting RNA chains FA/a
Volume 228.10 Å3
Hydrophobicity 0.442
Hydrophilicity 1.198
Buriedness 0.791
Don/acc character 1.642
SiteScore 0.887
D Score 0.607