HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9sfq

System information

Experimental technique X-ray
Experimental resolution 1.89
System mass 79.06 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 9sfq
Reference Yaremchuk Anna, Kriklivyi Ivan, Tukalo Michael, Cusack Stephen. . Class I tyrosyl‐tRNA synthetase has a class II mode of cognate tRNA recognition The EMBO Journal
Equivalence Class NR_all_66106.2
BGSU version: 4.48

Compound 1PE
Residue . / 510
Chain L / A
Non-redundant True
Interacting RNA chains B/T
RNA environment detailled protein, ion, other
RNA environment global RNA/Other
RNA family chains B/T: tRNA
RNA family global tRNA
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound 1PE
Residue . / 107
Chain U / T
Non-redundant True
Interacting RNA chains B/T
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains B/T: tRNA
RNA family global tRNA
Volume 92.61 Å3
Hydrophobicity 1.254
Hydrophilicity 0.656
Buriedness 0.626
Don/acc character 1.250
SiteScore 0.841
D Score 0.865
Kd