HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9qqa

System information

Experimental technique Electron Microscopy
Experimental resolution 2.80
System mass 3954.49 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Oryctolagus
RCSB PDB Entry 9qqa
Reference Gamerdinger Martin, Echeverria Blanca, Lentzsch Alfred M., Burg Nicolas, Fan Ziyi, Jaskolowski Mateusz, Scaiola Alain, Piening Selina, Shan Shu-ou, Ban Nenad, Deuerling Elke. . Mechanism of cotranslational protein N-myristoylation in human cells Molecular Cell

Compound SPM
Residue . / 2044
Chain VH / A2
Non-redundant False
Interacting RNA chains A/A2
Volume 766.95 Å3
Hydrophobicity 0.340
Hydrophilicity 0.993
Buriedness 0.780
Don/acc character 2.504
SiteScore 1.214
D Score 1.084

Compound SPM
Residue . / 5142
Chain MR / B5
Non-redundant True
Interacting RNA chains KA/B5
Volume 225.35 Å3
Hydrophobicity 0.000
Hydrophilicity 1.359
Buriedness 0.688
Don/acc character 1.809
SiteScore 0.813
D Score 0.679

Compound SPM
Residue . / 5143
Chain NR / B5
Non-redundant True
Interacting RNA chains KA/B5
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -