HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9psm

System information

Experimental technique Electron Microscopy
Experimental resolution 2.98
System mass 3138.61 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 9psm
Reference Wang Shuhui, Brischigliaro Michele, Zhang Yuekang, Wu Chunxiang, Zheng Wei, Barrientos Antoni, Xiong Yong. . Structural basis of TACO1-mediated efficient mitochondrial translation Nature Communications

Compound NAD
Residue . / 1701
Chain ZJ / AA
Non-redundant True
Interacting RNA chains AC/AA
Volume 595.45 Å3
Hydrophobicity 0.065
Hydrophilicity 1.502
Buriedness 0.702
Don/acc character 0.747
SiteScore 1.003
D Score 0.871

Compound SPM
Residue . / 1702
Chain AK / AA
Non-redundant True
Interacting RNA chains AC/AA
Volume 889.40 Å3
Hydrophobicity 0.252
Hydrophilicity 1.166
Buriedness 0.808
Don/acc character 3.202
SiteScore 1.223
D Score 1.044

Compound SPM
Residue . / 1780
Chain AN / AA
Non-redundant True
Interacting RNA chains AC/AA
Volume 453.45 Å3
Hydrophobicity 0.172
Hydrophilicity 1.216
Buriedness 0.790
Don/acc character 4.864
SiteScore 1.079
D Score 0.847