Complex 9ps7
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 3.08 |
| System mass | 3157.69 kDa |
| Deposition year | 2025 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Homo |
| RCSB PDB Entry | 9ps7 |
| Reference | Wang Shuhui, Brischigliaro Michele, Zhang Yuekang, Wu Chunxiang, Zheng Wei, Barrientos Antoni, Xiong Yong. . Structural basis of TACO1-mediated efficient mitochondrial translation Nature Communications |
| Equivalence Class |
NR_all_93855.31
BGSU version: 4.49 |
| Compound | NAD |
| Residue | . / 1701 |
| Chain | AK / AA |
| Non-redundant | True |
| Interacting RNA chains | CC/AA |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | CC/AA: rRNA |
| RNA family global | rRNA |
| Volume | 919.24 Å3 |
| Hydrophobicity | 0.124 |
| Hydrophilicity | 1.596 |
| Buriedness | 0.817 |
| Don/acc character | 0.734 |
| SiteScore | 1.080 |
| D Score | 0.910 |
| Kd | — |
| Compound | SPM |
| Residue | . / 1702 |
| Chain | BK / AA |
| Non-redundant | True |
| Interacting RNA chains | CC/AA |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | CC/AA: rRNA |
| RNA family global | rRNA |
| Volume | 942.56 Å3 |
| Hydrophobicity | 0.224 |
| Hydrophilicity | 1.203 |
| Buriedness | 0.810 |
| Don/acc character | 3.742 |
| SiteScore | 1.225 |
| D Score | 1.034 |
| Kd | — |
| Compound | SPM |
| Residue | . / 1779 |
| Chain | AN / AA |
| Non-redundant | True |
| Interacting RNA chains | CC/AA |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | CC/AA: rRNA |
| RNA family global | rRNA |
| Volume | 209.92 Å3 |
| Hydrophobicity | 0.090 |
| Hydrophilicity | 1.156 |
| Buriedness | 0.770 |
| Don/acc character | 3.617 |
| SiteScore | 0.642 |
| D Score | 0.484 |
| Kd | — |