HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9ps0

System information

Experimental technique Electron Microscopy
Experimental resolution 3.29
System mass 3084.48 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 9ps0
Reference Wang Shuhui, Brischigliaro Michele, Zhang Yuekang, Wu Chunxiang, Zheng Wei, Barrientos Antoni, Xiong Yong. . Structural basis of TACO1-mediated efficient mitochondrial translation Nature Communications

Compound NAD
Residue . / 1701
Chain HJ / AA
Non-redundant True
Interacting RNA chains Q/AA
Volume 753.57 Å3
Hydrophobicity 0.104
Hydrophilicity 1.730
Buriedness 0.807
Don/acc character 0.719
SiteScore 1.073
D Score 0.860

Compound SPM
Residue . / 1702
Chain IJ / AA
Non-redundant True
Interacting RNA chains Q/AA
Volume 858.53 Å3
Hydrophobicity 0.174
Hydrophilicity 1.181
Buriedness 0.809
Don/acc character 2.561
SiteScore 1.224
D Score 1.040

Compound SPM
Residue . / 1780
Chain IM / AA
Non-redundant True
Interacting RNA chains Q/AA
Volume 371.47 Å3
Hydrophobicity 0.321
Hydrophilicity 1.102
Buriedness 0.781
Don/acc character 4.631
SiteScore 1.054
D Score 0.856