HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9prq

System information

Experimental technique Electron Microscopy
Experimental resolution 3.34
System mass 3096.38 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 9prq
Reference Wang Shuhui, Brischigliaro Michele, Zhang Yuekang, Wu Chunxiang, Zheng Wei, Barrientos Antoni, Xiong Yong. . Structural basis of TACO1-mediated efficient mitochondrial translation Nature Communications

Compound NAD
Residue . / 1701
Chain XJ / AA
Non-redundant True
Interacting RNA chains BC/AA
Volume 894.54 Å3
Hydrophobicity 0.151
Hydrophilicity 1.502
Buriedness 0.822
Don/acc character 0.737
SiteScore 1.083
D Score 0.943

Compound SPM
Residue . / 1702
Chain YJ / AA
Non-redundant True
Interacting RNA chains BC/AA
Volume 882.20 Å3
Hydrophobicity 0.189
Hydrophilicity 1.160
Buriedness 0.808
Don/acc character 3.240
SiteScore 1.224
D Score 1.047

Compound SPM
Residue . / 1780
Chain YM / AA
Non-redundant True
Interacting RNA chains BC/AA
Volume 556.69 Å3
Hydrophobicity 0.190
Hydrophilicity 1.288
Buriedness 0.807
Don/acc character 3.569
SiteScore 1.145
D Score 0.905