Complex 9pij
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.20 |
| System mass | 2186.88 kDa |
| Deposition year | 2025 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 9pij |
| Reference | Devarkar Swapnil C., Lomakin Ivan B., Wang Jimin, Grada Ayman, Bunick Christopher G.. . Dual site targeting of the bacterial 70S ribosome by tetracyclines Nature Communications |
| Equivalence Class |
NR_all_83717.186,
NR_all_56726.171
BGSU version: 4.49 |
| Compound | MIY |
| Residue | . / 1635 |
| Chain | LC / A |
| Non-redundant | True |
| Interacting RNA chains | AA/X, F/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | F/A: rRNA, AA/X: mRNA |
| RNA family global | multiple |
| Volume | 209.57 Å3 |
| Hydrophobicity | 0.502 |
| Hydrophilicity | 0.921 |
| Buriedness | 0.748 |
| Don/acc character | 1.929 |
| SiteScore | 1.055 |
| D Score | 0.895 |
| Kd | — |
| Compound | MIY |
| Residue | . / 3005 |
| Chain | AG / a |
| Non-redundant | True |
| Interacting RNA chains | CA/a |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | CA/a: rRNA |
| RNA family global | rRNA |
| Volume | 337.17 Å3 |
| Hydrophobicity | 0.211 |
| Hydrophilicity | 0.942 |
| Buriedness | 0.712 |
| Don/acc character | 3.190 |
| SiteScore | 0.943 |
| D Score | 0.758 |
| Kd | — |