HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9p73

System information

Experimental technique Electron Microscopy
Experimental resolution 2.66
System mass 3359.90 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 9p73
Reference Zheng Wei, Zhang Yuekang, Wang Jimin, Wang Shuhui, Chai Pengxin, Bailey Elizabeth J., Zhu Chenghao, Guo Wangbiao, Devarkar Swapnil C., Wu Shenping, Lin Jianfeng, Zhang Kai, Liu Jun, Lomakin Ivan B., Xiong Yong. . Visualizing the translation landscape in human cells at high resolution Nature Communications

Compound SPM
Residue . / 5258
Chain KJ / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume 354.66 Å3
Hydrophobicity 0.432
Hydrophilicity 0.952
Buriedness 0.679
Don/acc character 1.667
SiteScore 1.155
D Score 1.037

Compound SPM
Residue . / 5263
Chain PJ / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound SPM
Residue . / 5264
Chain QJ / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound SPM
Residue . / 5267
Chain TJ / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume 879.45 Å3
Hydrophobicity 0.117
Hydrophilicity 1.847
Buriedness 0.833
Don/acc character 1.253
SiteScore 1.090
D Score 0.838

Compound SPM
Residue . / 5288
Chain OK / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume 447.62 Å3
Hydrophobicity 0.330
Hydrophilicity 1.292
Buriedness 0.848
Don/acc character 1.126
SiteScore 0.916
D Score 0.791

Compound SPM
Residue . / 5291
Chain RK / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume 1231.03 Å3
Hydrophobicity 0.116
Hydrophilicity 1.535
Buriedness 0.808
Don/acc character 0.961
SiteScore 1.073
D Score 0.924

Compound SPM
Residue . / 5292
Chain SK / L5
Non-redundant True
Interacting RNA chains NA/L5
Volume 547.77 Å3
Hydrophobicity 0.244
Hydrophilicity 1.182
Buriedness 0.770
Don/acc character 1.304
SiteScore 1.048
D Score 1.017