Complex 9i1w
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.38 |
| System mass | 2037.19 kDa |
| Deposition year | 2025 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermochaetoides |
| RCSB PDB Entry | 9i1w |
| Reference | Wild Klemens, Klein Marius, Burkard Alicia, Marchand Virginie, Kellner Nikola, Paez Antonio, Pastore Stefan, Butto Tamer, Motorin Yuri, Helm Mark, Sinning Irmgard. . Pseudouridine increases ribosome stability in a thermophilic eukaryote Nucleic Acids Research |
| Equivalence Class |
NR_all_93493.10
BGSU version: 4.49 |
| Compound | SPM |
| Residue | . / 3403 |
| Chain | BB / 1 |
| Non-redundant | True |
| Interacting RNA chains | A/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/1: rRNA |
| RNA family global | rRNA |
| Volume | 616.71 Å3 |
| Hydrophobicity | 0.147 |
| Hydrophilicity | 1.646 |
| Buriedness | 0.879 |
| Don/acc character | 0.982 |
| SiteScore | 1.121 |
| D Score | 0.931 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3404 |
| Chain | CB / 1 |
| Non-redundant | True |
| Interacting RNA chains | C/4, A/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/1: rRNA, C/4: rRNA |
| RNA family global | rRNA |
| Volume | 439.38 Å3 |
| Hydrophobicity | 0.200 |
| Hydrophilicity | 1.093 |
| Buriedness | 0.618 |
| Don/acc character | 1.080 |
| SiteScore | 1.097 |
| D Score | 0.955 |
| Kd | — |