HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9i1w

System information

Experimental technique Electron Microscopy
Experimental resolution 2.38
System mass 2037.19 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism Thermochaetoides
RCSB PDB Entry 9i1w
Reference Wild Klemens, Klein Marius, Burkard Alicia, Marchand Virginie, Kellner Nikola, Paez Antonio, Pastore Stefan, Butto Tamer, Motorin Yuri, Helm Mark, Sinning Irmgard. . Pseudouridine increases ribosome stability in a thermophilic eukaryote Nucleic Acids Research

Compound SPM
Residue . / 3403
Chain BB / 1
Non-redundant True
Interacting RNA chains A/1
Volume 616.71 Å3
Hydrophobicity 0.147
Hydrophilicity 1.646
Buriedness 0.879
Don/acc character 0.982
SiteScore 1.121
D Score 0.931

Compound SPM
Residue . / 3404
Chain CB / 1
Non-redundant True
Interacting RNA chains C/4, A/1
Volume 439.38 Å3
Hydrophobicity 0.200
Hydrophilicity 1.093
Buriedness 0.618
Don/acc character 1.080
SiteScore 1.097
D Score 0.955