HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9h51

System information

Experimental technique Electron Microscopy
Experimental resolution 3.10
System mass 1339.46 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 9h51
Equivalence Class NR_all_93855.31
BGSU version: 4.49

Compound NAD
Residue . / 1701
Chain IA / A
Non-redundant True
Interacting RNA chains B/A
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains B/A: rRNA
RNA family global rRNA
Volume 927.82 Å3
Hydrophobicity 0.299
Hydrophilicity 1.269
Buriedness 0.832
Don/acc character 0.867
SiteScore 1.090
D Score 1.025
Kd

Compound SPM
Residue . / 1702
Chain JA / A
Non-redundant True
Interacting RNA chains B/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains B/A: rRNA
RNA family global rRNA
Volume 857.16 Å3
Hydrophobicity 0.137
Hydrophilicity 1.123
Buriedness 0.794
Don/acc character 3.889
SiteScore 1.214
D Score 1.050
Kd