Complex 9ec4
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.85 |
| System mass | 54.07 kDa |
| Deposition year | 2024 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 9ec4 |
| Reference | Spradlin Savannah F, Dickerson Kyle A, Batey Robert T. . Structural and functional clues challenge the hypothesis that the yjdF riboswitch is natively regulated through broad recognition of azaaromatic compounds Nucleic Acids Research |
| Equivalence Class |
NR_all_02670.1
BGSU version: 4.48 |
| Compound | CTI |
| Residue | . / 101 |
| Chain | C / M |
| Non-redundant | True |
| Interacting RNA chains | A/M |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/M: riboswitch |
| RNA family global | riboswitch |
| Volume | 761.80 Å3 |
| Hydrophobicity | 1.102 |
| Hydrophilicity | 1.017 |
| Buriedness | 0.777 |
| Don/acc character | 1.318 |
| SiteScore | 1.207 |
| D Score | 1.075 |
| Kd | — |
| Compound | CTI |
| Residue | . / 101 |
| Chain | O / A |
| Non-redundant | True |
| Interacting RNA chains | B/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 779.98 Å3 |
| Hydrophobicity | 1.151 |
| Hydrophilicity | 1.078 |
| Buriedness | 0.773 |
| Don/acc character | 1.285 |
| SiteScore | 1.200 |
| D Score | 1.052 |
| Kd | — |