HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8p85

System information

Experimental technique X-ray
Experimental resolution 2.90
System mass 6601.12 kDa
Deposition year 2023
Molecule type RNA/Protein
# RNA entities 1
Organism Saccharomyces
RCSB PDB Entry 8p85
Equivalence Class NR_all_90506.85
BGSU version: 4.48

Compound VDU
Residue . / 4195
Chain BVA / 1
Non-redundant True
Interacting RNA chains MA/1
RNA environment detailled protein, ion, other
RNA environment global RNA/Other
RNA family chains MA/1: rRNA
RNA family global rRNA
Volume 359.12 Å3
Hydrophobicity 0.695
Hydrophilicity 0.851
Buriedness 0.708
Don/acc character 1.126
SiteScore 1.043
D Score 1.087
Kd

Compound VDU
Residue . / 4255
Chain TGC / AR
Non-redundant True
Interacting RNA chains ZB/AR
RNA environment detailled protein, ion, other
RNA environment global RNA/Other
RNA family chains ZB/AR: rRNA
RNA family global rRNA
Volume 355.01 Å3
Hydrophobicity 0.670
Hydrophilicity 0.873
Buriedness 0.689
Don/acc character 0.870
SiteScore 1.026
D Score 1.068
Kd