HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8p7y

System information

Experimental technique Electron Microscopy
Experimental resolution 3.70
System mass 2393.54 kDa
Deposition year 2023
Molecule type RNA/Protein
# RNA entities 5
Organism Mycoplasmoides
RCSB PDB Entry 8p7y
Reference Xue Liang, Spahn Christian M. T., Schacherl Magdalena, Mahamid Julia. . Structural insights into context-dependent inhibitory mechanisms of chloramphenicol in cells Nature Structural & Molecular Biology

Compound SPM
Residue . / 3243
Chain QK / 3
Non-redundant True
Interacting RNA chains D/3
Volume 802.96 Å3
Hydrophobicity 0.273
Hydrophilicity 1.259
Buriedness 0.770
Don/acc character 1.521
SiteScore 1.048
D Score 0.991

Compound SPM
Residue . / 3251
Chain YK / 3
Non-redundant False
Interacting RNA chains D/3
Volume 719.27 Å3
Hydrophobicity 0.258
Hydrophilicity 1.235
Buriedness 0.755
Don/acc character 2.202
SiteScore 1.038
D Score 0.990