Complex 8p4v
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.16 |
| System mass | 6616.43 kDa |
| Deposition year | 2023 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Saccharomyces |
| RCSB PDB Entry | 8p4v |
| Reference | Terrosu Salvatore, Nurullina Liliia, Supantanapong Nantamon, Pak Bonnie S., Nguyen Sierra, Holm Mikael, Wu Cheng, Lin Min, Horne David, Sachs Matthew S., Blanchard Scott C., Yusupov Marat, Vanderwal Christopher D.. . Synthesis of Differentially Halogenated Lissoclimide Analogues To Probe Ribosome E-Site Binding ACS Chemical Biology |
| Equivalence Class |
NR_all_90506.85,
NR_all_03510.74
BGSU version: 4.48 |
| Compound | X1K |
| Residue | . / 4181 |
| Chain | DJA / 1 |
| Non-redundant | True |
| Interacting RNA chains | A/1 |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | A/1: rRNA |
| RNA family global | rRNA |
| Volume | 305.27 Å3 |
| Hydrophobicity | 0.604 |
| Hydrophilicity | 0.998 |
| Buriedness | 0.708 |
| Don/acc character | 1.041 |
| SiteScore | 1.015 |
| D Score | 1.039 |
| Kd | — |
| Compound | X1K |
| Residue | . / 4205 |
| Chain | YSB / AR |
| Non-redundant | True |
| Interacting RNA chains | TA/AR |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | TA/AR: rRNA |
| RNA family global | rRNA |
| Volume | 363.24 Å3 |
| Hydrophobicity | 0.378 |
| Hydrophilicity | 0.999 |
| Buriedness | 0.701 |
| Don/acc character | 1.229 |
| SiteScore | 1.010 |
| D Score | 1.035 |
| Kd | — |