Complex 8g5z
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.64 |
| System mass | 3348.42 kDa |
| Deposition year | 2023 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Homo |
| RCSB PDB Entry | 8g5z |
| Reference | Holm Mikael, Natchiar S. Kundhavai, Rundlet Emily J., Myasnikov Alexander G., Watson Zoe L., Altman Roger B., Wang Hao-Yuan, Taunton Jack, Blanchard Scott C.. . mRNA decoding in human is kinetically and structurally distinct from bacteria Nature |
| Equivalence Class |
NR_all_65061.63
BGSU version: 4.49 |
| Compound | 3H3 |
| Residue | . / 5119 |
| Chain | WH / L5 |
| Non-redundant | True |
| Interacting RNA chains | C/L5 |
| RNA environment detailled | protein, other |
| RNA environment global | RNA/Other |
| RNA family chains | C/L5: rRNA |
| RNA family global | rRNA |
| Volume | 313.50 Å3 |
| Hydrophobicity | 0.312 |
| Hydrophilicity | 1.049 |
| Buriedness | 0.656 |
| Don/acc character | 0.960 |
| SiteScore | 0.972 |
| D Score | 0.992 |
| Kd | — |
| Compound | ANM |
| Residue | . / 5101 |
| Chain | EH / L5 |
| Non-redundant | True |
| Interacting RNA chains | C/L5 |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | C/L5: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | GSP |
| Residue | . / 501 |
| Chain | VV / EF |
| Non-redundant | True |
| Interacting RNA chains | C/L5 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | C/L5: rRNA |
| RNA family global | rRNA |
| Volume | 447.96 Å3 |
| Hydrophobicity | 0.090 |
| Hydrophilicity | 1.689 |
| Buriedness | 0.846 |
| Don/acc character | 0.682 |
| SiteScore | 1.099 |
| D Score | 0.897 |
| Kd | — |