HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8g2b

System information

Experimental technique X-ray
Experimental resolution 2.55
System mass 4569.27 kDa
Deposition year 2023
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 8g2b
Reference Aleksandrova Elena V., Wu Kelvin J. Y., Tresco Ben I. C., Syroegin Egor A., Killeavy Erin E., Balasanyants Samson M., Svetlov Maxim S., Gregory Steven T., Atkinson Gemma C., Myers Andrew G., Polikanov Yury S.. . Structural basis of Cfr-mediated antimicrobial resistance and mechanisms to evade it Nature Chemical Biology
Equivalence Class NR_all_35542.166, NR_all_97519.80
BGSU version: 4.49

Compound 6IF
Residue . / 4084
Chain ZSA / 1A
Non-redundant True
Interacting RNA chains CB/1x, A/1A
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains A/1A: rRNA, CB/1x: mRNA
RNA family global multiple
Volume 360.15 Å3
Hydrophobicity 0.541
Hydrophilicity 0.905
Buriedness 0.673
Don/acc character 1.280
SiteScore 1.160
D Score 1.049
Kd

Compound 6IF
Residue . / 3831
Chain NQC / 2A
Non-redundant True
Interacting RNA chains EB/2A, GD/2x
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains EB/2A: rRNA, GD/2x: mRNA
RNA family global multiple
Volume 300.13 Å3
Hydrophobicity 0.809
Hydrophilicity 0.768
Buriedness 0.663
Don/acc character 1.399
SiteScore 1.029
D Score 1.088
Kd