Complex 7rq8
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.50 |
| System mass | 4566.39 kDa |
| Deposition year | 2021 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermus |
| RCSB PDB Entry | 7rq8 |
| Reference | Mitcheltree Matthew J., Pisipati Amarnath, Syroegin Egor A., Silvestre Katherine J., Klepacki Dorota, Mason Jeremy D., Terwilliger Daniel W., Testolin Giambattista, Pote Aditya R., Wu Kelvin J. Y., Ladley Richard Porter, Chatman Kelly, Mankin Alexander S., Polikanov Yury S., Myers Andrew G.. . A synthetic antibiotic class overcoming bacterial multidrug resistance Nature |
| Equivalence Class |
NR_all_35542.166,
NR_all_97519.80
BGSU version: 4.49 |
| Compound | 6IF |
| Residue | . / 4109 |
| Chain | YTA / 1A |
| Non-redundant | True |
| Interacting RNA chains | A/1A, CB/1x |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | A/1A: rRNA, CB/1x: tRNA |
| RNA family global | multiple |
| Volume | 383.82 Å3 |
| Hydrophobicity | 0.743 |
| Hydrophilicity | 1.004 |
| Buriedness | 0.665 |
| Don/acc character | 1.212 |
| SiteScore | 0.985 |
| D Score | 1.011 |
| Kd | — |
| Compound | 6IF |
| Residue | . / 3731 |
| Chain | ZNC / 2A |
| Non-redundant | True |
| Interacting RNA chains | GD/2x, EB/2A |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | EB/2A: rRNA, GD/2x: tRNA |
| RNA family global | multiple |
| Volume | 333.40 Å3 |
| Hydrophobicity | 0.928 |
| Hydrophilicity | 0.662 |
| Buriedness | 0.676 |
| Don/acc character | 1.567 |
| SiteScore | 1.058 |
| D Score | 1.129 |
| Kd | — |