Complex 7qtl
Legend
Pocket colors by molecule type
RNA
Protein
DNA
These colors appear when a pocket is selected (the structure fades to show the pocket surface). Colors from the molecule-type palette (RNA / protein / DNA).
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.48 |
| System mass | 273.29 kDa |
| Deposition year | 2022 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Alphainfluenzavirus |
| RCSB PDB Entry | 7qtl |
| Reference | Kouba Tomas, Dubankova Anna, Drncova Petra, Donati Elisa, Vidossich Pietro, Speranzini Valentina, Pflug Alex, Huchting Johanna, Meier Chris, De Vivo Marco, Cusack Stephen. 2023. Direct observation of backtracking by influenza A and B polymerases upon consecutive incorporation of the nucleoside analog T1106 Cell Reports |
| Equivalence Class |
NR_all_71850.1
BGSU version: 4.52 |
Pockets List
Legend
Cell colors for SiteScore and D Score:
Favourable
Intermediate
Unfavourable
Not available
| Score | Threshold | Meaning |
|---|---|---|
| SiteScore | < 0.8 | Non-drug binding site |
| SiteScore | 0.8 – 1.0 | Potential drug binding site |
| SiteScore | > 1.0 | Promising binding site |
| D Score | < 0.83 | Undruggable |
| D Score | 0.83 – 0.98 | Difficult |
| D Score | > 0.98 | Druggable |
Tick a pocket below to highlight it in the 3D structure above.
| Compound | 2TM |
| Residue | . / 901 |
| Chain | G / B |
| Non-redundant | True |
| Interacting RNA chains | F/M, E/R |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | E/R: unknown, F/M: mRNA |
| RNA family global | mRNA |
| Volume | 776.21 Å3 |
| Hydrophobicity | 0.064 |
| Hydrophilicity | 1.932 |
| Buriedness | 0.845 |
| Don/acc character | 0.521 |
| SiteScore | 1.098 |
| D Score | 0.817 |
| Kd | — |