HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7eoh

System information

Experimental technique X-ray
Experimental resolution 1.64
System mass 16.28 kDa
Deposition year 2021
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 7eoh
Reference Huang Kaiyi, Chen Xianjun, Li Chunyan, Song Qianqian, Li Huiwen, Zhu Linyong, Yang Yi, Ren Aiming. . Structure-based investigation of fluorogenic Pepper aptamer Nature Chemical Biology
Equivalence Class NR_all_54098.5
BGSU version: 4.48

Compound J8F
Residue . / 101
Chain B / A
Non-redundant False
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: aptamer_rna
RNA family global aptamer_rna
Volume 209.23 Å3
Hydrophobicity 1.088
Hydrophilicity 0.751
Buriedness 0.603
Don/acc character 1.926
SiteScore 1.142
D Score 1.057
Kd