HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7edl

System information

Experimental technique X-ray
Experimental resolution 2.60
System mass 16.14 kDa
Deposition year 2021
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 7edl
Equivalence Class NR_all_71199.7
BGSU version: 4.49

Compound GET
Residue . / 101
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: rRNA, B/B: rRNA
RNA family global rRNA
Volume 76.83 Å3
Hydrophobicity 0.117
Hydrophilicity 0.952
Buriedness 0.555
Don/acc character 4.797
SiteScore 0.766
D Score 0.570
Kd

Compound GET
Residue . / 101
Chain E / B
Non-redundant True
Interacting RNA chains A/A, B/B
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: rRNA, B/B: rRNA
RNA family global rRNA
Volume 240.10 Å3
Hydrophobicity 0.185
Hydrophilicity 0.890
Buriedness 0.618
Don/acc character 1.689
SiteScore 0.946
D Score 0.790
Kd