Complex 6xzb
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.54 |
| System mass | 2164.91 kDa |
| Deposition year | 2020 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 6xzb |
| Reference | Pichkur Evgeny B., Paleskava Alena, Tereshchenkov Andrey G., Kasatsky Pavel, Komarova Ekaterina S., Shiriaev Dmitrii I., Bogdanov Alexey A., Dontsova Olga A., Osterman Ilya A., Sergiev Petr V., Polikanov Yury S., Myasnikov Alexander G., Konevega Andrey L.. . Insights into the improved macrolide inhibitory activity from the high-resolution cryo-EM structure of dirithromycin bound to the E. coli 70S ribosome RNA |
| Equivalence Class |
NR_all_83717.185
BGSU version: 4.48 |
| Compound | DI0 |
| Residue | . / 3001 |
| Chain | CB / A2 |
| Non-redundant | True |
| Interacting RNA chains | V/A2 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | V/A2: rRNA |
| RNA family global | rRNA |
| Volume | 553.60 Å3 |
| Hydrophobicity | 0.246 |
| Hydrophilicity | 1.237 |
| Buriedness | 0.764 |
| Don/acc character | 1.364 |
| SiteScore | 0.855 |
| D Score | 0.995 |
| Kd | — |