HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6xqd

System information

Experimental technique X-ray
Experimental resolution 2.80
System mass 4470.35 kDa
Deposition year 2020
Molecule type RNA/Protein
# RNA entities 5
Organism Thermus
RCSB PDB Entry 6xqd
Reference Batool Zahra, Lomakin Ivan B., Polikanov Yury S., Bunick Christopher G.. . Sarecycline interferes with tRNA accommodation and tethers mRNA to the 70S ribosome Proceedings of the National Academy of Sciences

Compound V7A
Residue . / 1835
Chain JJB / 1a
Non-redundant False
Interacting RNA chains FA/1a
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound V7A
Residue . / 3210
Chain RCD / 2a
Non-redundant True
Interacting RNA chains HC/2a
Volume 135.48 Å3
Hydrophobicity 0.103
Hydrophilicity 1.382
Buriedness 0.761
Don/acc character 1.031
SiteScore 0.909
D Score 0.775