HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6rw5

System information

Experimental technique Electron Microscopy
Experimental resolution 3.14
System mass 1258.06 kDa
Deposition year 2019
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 6rw5
Reference Khawaja Anas, Itoh Yuzuru, Remes Cristina, Spåhr Henrik, Yukhnovets Olessya, Höfig Henning, Amunts Alexey, Rorbach Joanna. . Distinct pre-initiation steps in human mitochondrial translation Nature Communications

Compound NAD
Residue . / 1701
Chain HA / A
Non-redundant False
Interacting RNA chains A/A
Volume 938.45 Å3
Hydrophobicity 0.269
Hydrophilicity 1.314
Buriedness 0.837
Don/acc character 0.745
SiteScore 0.813
D Score 1.014

Compound SPM
Residue . / 1702
Chain IA / A
Non-redundant False
Interacting RNA chains A/A
Volume 733.68 Å3
Hydrophobicity 0.190
Hydrophilicity 1.169
Buriedness 0.828
Don/acc character 2.701
SiteScore 1.237
D Score 1.056

Compound SRY
Residue . / 1703
Chain JA / A
Non-redundant True
Interacting RNA chains A/A
Volume 283.66 Å3
Hydrophobicity 0.238
Hydrophilicity 1.047
Buriedness 0.686
Don/acc character 3.337
SiteScore 1.085
D Score 0.937